Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789405.1_cds_XP_016496117.1_969
CDS Infomation

[gene=LOC107815113] [db_xref=GeneID:107815113] [protein=butyrate--CoA ligase AAE11, peroxisomal-like] [protein_id=XP_016496117.1] [location=complement(join(3375..4913,5604..5801))] [gbkey=CDS]
Sequence

ATGGACAGGTTACCTAAAAATGGAGCTAATTATGTGCCTCTTACACCTCTCACCTTCTTA
ACCAGAGCCTCTAACTCTTACGCCACACGCACCTCTGTTATTTATGCCAATGTCCGCTTC
ACTTGGCGGCAAACGTACGAGCGTTGTTGTCGTCTCGCTTCTTCGCTCAGGTCCTTAAAC
ATTGTCAAGAATGACGTGGTTTCCGTCCTGGCACCAAATGTACCGGCCATGTTAGAGATG
CATTTTGCTGTGCCAATGGCAGGGGCTGTTCTGAACACCATTAATACAAGGCTAGACCCT
AGAAACGTTGCCCTCATTCTCAAGCACTCAGAAGCTAAGGTCTTTTTTGTTGACTATGAA
TACGTTGACAAAGCTAAAAAGGCCCTTGAAATATTAATGTCCGACTTGGAAATGCCAATG
CCTCTCATCGCTGTAATTGATGACCTCGAATCCCCTACTGGAATCCGGCTAGGGGAACTT
GAATATGAGCAGTTGGTGTACCAAGGCAACCCTGAATTTGTGCTGGAAAATATTGATGAT
GAATGGGATCCGATCACTTTGAGTTATACATCAGGTACAACTTCAGAGCCAAAGGGAGTT
GTTTACAGCCACAGAGGTGCATTCTTGAGCACTTTAAGTTTAATTTTGGGATGGGAAATG
GGAACGGAGTCCGTATACTTATGGTCCCTCCCAATGTTTCACTGCAATGGGTGGACTTTC
ACATGGGGAATTGCTGCAAGGGGTGGGACCAATGTCTGCATCCGCAATACTACGGCCCAA
GAAATCTACTCCAACATAACGTTGCACAAAGTTACACATATGTGTGCTGCACCTGTTGTT
CTCAACATAATCCTCGAGGCCAAGCCACATGAGCAGCGCCAAATAACAACCCCAATCCAA
ATACTGGTGGGGGGTGCACCCCCACCAGCTCCACTTCTCGAGAAAATAGAGAGGCTGGGG
TTCCACGTGGTTCATGCCTATGGCCTCACTGAGGCCACAGGACCAGCACTTGTGTGCGAG
TGGCAAGCTAAGTGGAATAAATTACCATGGGAAGAAAAAGCCAAGTTGAAGGCCAGACAA
GGCCTCGGCATACTAACACTTGCCGATGTTGATGTGAAAAATTTCAAGACTATGCAAAGT
GTGCCTCGTGATGGAAAAACAACAGGGGAAATATGCCTGAGGGGAAGCAGCATAATGAAA
GGGTACTTAAAAAATGATAAAGCAAATTCAGAAGTATTCAAGAATGGTTGGTTTTTCACA
GGAGATATGGGAGTGATTCACTCTGATGGGTACTTGGAAATCAAAGATAGATGCAAAGAT
GTAATTATTTCAGGTGGAGAGAACATCAGCAGCGTCGAAGTAGAAAGTGCAATACTGAAA
CATCCAAGCGTAATTGAGGCATCTGTTGTGGCCATGACACATCCTAGATGGGGTGAAACT
CCATGTGCCTTTGTTATATTGAGGGAAAACTCCAACTTTAAAGAAGCAGAGATCATAGCA
CATTGTCGGAAGAACTTGCCTGGATTCATGGTACCAAAGAAGGTTAAATTTGTGGAAGAG
TTGCCCAAAACTGGAACAGGGAAAGTGCAGAAAAACATTTTGAGAGCAGTGGCAAAGACA
TTTGTGATAACGGAAAATGTAAATCAAACAAGCAAAAAGTCAAGCCAAGTCATCAGGGAA
AAGCCTCGAGCTTACGATCAGAGTCATGAGCAGATTCTTGCTTTGTCTCGTCTTTAG

Peptide Sequence

PEP ID

XP_016496117.1
PEP Infomation

PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Nicotiana tabacum]
Sequence

MDRLPKNGANYVPLTPLTFLTRASNSYATRTSVIYANVRFTWRQTYERCCRLASSLRSLN
IVKNDVVSVLAPNVPAMLEMHFAVPMAGAVLNTINTRLDPRNVALILKHSEAKVFFVDYE
YVDKAKKALEILMSDLEMPMPLIAVIDDLESPTGIRLGELEYEQLVYQGNPEFVLENIDD
EWDPITLSYTSGTTSEPKGVVYSHRGAFLSTLSLILGWEMGTESVYLWSLPMFHCNGWTF
TWGIAARGGTNVCIRNTTAQEIYSNITLHKVTHMCAAPVVLNIILEAKPHEQRQITTPIQ
ILVGGAPPPAPLLEKIERLGFHVVHAYGLTEATGPALVCEWQAKWNKLPWEEKAKLKARQ
GLGILTLADVDVKNFKTMQSVPRDGKTTGEICLRGSSIMKGYLKNDKANSEVFKNGWFFT
GDMGVIHSDGYLEIKDRCKDVIISGGENISSVEVESAILKHPSVIEASVVAMTHPRWGET
PCAFVILRENSNFKEAEIIAHCRKNLPGFMVPKKVKFVEELPKTGTGKVQKNILRAVAKT
FVITENVNQTSKKSSQVIREKPRAYDQSHEQILALSRL

Transcript Sequence

Gene sequence data has not been registered.